Probing the low-frequency vibrational modes of viruses with Raman scattering--bacteriophage M13 in water.
نویسندگان
چکیده
Raman spectroscopy is used to study low-wave-number (</=20 cm(-1)) acoustic vibrations of the M13 phage. A well-defined Raman line is observed at around 8.5 cm(-1). The experimental results are compared with theoretical calculations based on an elastic continuum model and appropriate Raman selection rules derived from a bond polarizability model. The observed Raman mode is shown to belong to one of the Raman-active axial modes of the M13 phage protein coat. It is expected that the detection and characterization of this low-frequency vibrational mode can be used for applications in biomedical nanotechnology such as for monitoring the process of virus functionalization and self-assembly.
منابع مشابه
Vibrational Modes of Nano-Template Viruses
Viruses have recently attracted attention as biological templates for assembly of nanostructures and nanoelectronic circuits. They can be coated with metals, silica or semiconductor materials and form end-to-end nanorod assemblies. Such viruses as tobacco mosaic virus (TMV) and M13 bacteriophage have appropriate cylindrical shape and particularly suitable dimensions: M13 is 860 nm long and 6.5 ...
متن کاملVibrational energy funneling in viruses-simulations of impulsive stimulated Raman scattering in M13 bacteriophage.
The vibrational excitation of a tubular M13 bacteriophage capsid is simulated using classical molecular dynamics. The excitation occurs through impulsive stimulated Raman scattering by ultra-short laser pulses which ping the vibrational modes of the capsid. Tuning the laser pulse temporal width determines the frequency region of the capsid that is excited. The simulations reveal that electromag...
متن کاملRaman intensity and spectra predictions for cylindrical viruses.
A theoretical framework for predicting low frequency Raman vibrational spectra of viral capsids is presented and applied to the M13 bacteriophage. The method uses a continuum elastic theory for the vibrational modes and a bond-charge polarizability model of an amorphous material to roughly predict the Raman intensities. Comparison is made to experimental results for the M13 bacteriophage virus.
متن کاملTheory of the low frequency mechanical modes and Raman spectra of the M13 bacteriophage capsid with atomic detail.
We present a theoretical study of the low frequency vibrational modes of the M13 bacteriophage using a fully atomistic model. Using ideas from electronic structure theory, the few lowest vibrational modes of the M13 bacteriophage are determined using classical harmonic analysis. The relative Raman intensity is estimated for each of the mechanical modes using a bond polarizability model. Compari...
متن کاملSpectroscopy, Structural, and Optical Investigations of NiFe2O4 Ferrite
Ni ferrite crystalline material is synthesized using a sol-gel method at two different temperatures. The vibrational and stretching modes, crystalline phase, size distribution and morphology of the products are investigated via Raman back-scattering and Fourier transform infrared (FTIR) spectroscopy, XRD and FESEM, respectively. Vibrational modes of spinel ferrite are observed at Raman and FTIR...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Journal of biomedical optics
دوره 12 2 شماره
صفحات -
تاریخ انتشار 2007